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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs10194913 chr2:109503862 A/G 0 509 2.05 26.57 37.75 KM Plot
KIRC rs10195050 chr2:109491020 A/G 1.01E-11 505 37.73 26.5 2.3 KM Plot
KIRC rs10203509 chr2:109502438 T/C 6.77E-12 509 37.73 26.43 2.3 KM Plot
KIRC rs10211606 chr2:109413810 G/A 5.29E-8 504 37.77 26.27 2.03 KM Plot
KIRC rs10406609 chr19:46345208 T/G 8.35E-8 507 38.05 28.03 1.77 KM Plot
KIRC rs10413756 chr19:46340806 C/T 7.81E-8 508 38.1 28.03 1.77 KM Plot
KIRC rs10420834 chr19:46347542 G/T 7.4E-8 509 38.47 28.03 1.77 KM Plot
KIRC rs1045537 chr6:26096748 G/C 2.18E-8 493 37.57 36.28 3.37 KM Plot
KIRC rs10488897 chr4:107838634 T/A 1.81E-7 509 37.73 29.5 7.1 KM Plot
KIRC rs10489535 chr1:6343825 A/G 6.71E-11 509 2.3 37.77 37.37 KM Plot
KIRC rs10492383 chr12:29528595 C/T 5.58E-9 507 37.73 33.93 6.07 KM Plot
KIRC rs10502652 chr18:33227581 A/C 3.2E-5 509 37.77 30.45 7.37 KM Plot
KIRC rs10514888 chr5:59152509 T/C 0 505 37.33 40 0.07 KM Plot
KIRC rs10518400 chr4:123582426 G/A 1.09E-5 506 37.33 38 10.92 KM Plot
KIRC rs10560614 chr2:67532318 AAT/A 1.88E-7 505 37.18 37.73 2.03 KM Plot